Contents 

Mira Pro x64
Contents
New Features
Getting Application Help
About this Document
Tech Support
Getting Started
Glossary of Terms
Selecting Source Images
Setting Application Properties
Command Dialogs
Screen Capture
Mira's Special Folders
Changing the GUI Theme
Critical Concepts
Tip of the Day
Tutorials
Overview
Displaying an Image
Displaying an Image Set
Creating Plots from Images
Introduction to Image Registration
Making a Scatter Plot of Measurements
Using FITS Keywords to Analyze Image Data
Introduction to Aperture Photometry
Doing Time Series Photometry
Introduction to File Event Scripting
Cleaning Artifacts from an Image Set
Introduction to Source Extraction
Introduction to Astrometric Calibration
Examples
File Lists
Creating File Lists
Opening Files from File Lists
Images
The Boost Transfer Function Option
Image Rotation
Adding Labels to an Image
Editing the FITS Header
Image Registration
Plots
Plot Windows
Plotting Examples
Plotting an Averaged Line
Row Plots
Adding Series to a Line Profile Plot
Changing Plot Series Attributes
Plotting in World Coordinates
Comparison of Histogram Preferences
Contour Plotting Smoothing
3-D Plots
3-D Pixel Representations
3-D Z-Scaling
Measurements
Distance and Angle
Selecting Cells in a Grid Control
Tutorial: Making a Scatter Plot of Measurements
Fixing Header Problems in Photometric Data
Importing a Photometry Catalog
Image Basics
Image Types
Image Sets
Overview
Image Set Flags
Image Set Properties
Image Set Toolbar
Image Set Applications
Image Sets Menu
Duplicating an Image Set
File Lists
Overview
Creating file lists
Editing file lists
Opening files from file lists
Opening Images
Overview
File opening and saving commands
Using Drag & Drop
Opening image files
Creating an image catalog
Duplicating an Image
Duplicating an Image Set
Opening files from file Lists
Using File Opening Plug-ins
Selecting Source Images
Importing a Binary Image
Importing a Text Image
Saving Images
Saving a single image
Saving an image set
Saving all image set members
Saving an image set to a Folder
Saving an image set with a filename Suffix
Saving an image set to a file list
Exporting as a binary image
Exporting as a text image
Palettes
Overview
Image Palettes
Palette Pane
Palette Properties
Using the Palette Property Trackbars
Rubber Banding the Palette Graph
Importing Palettes
Transfer Functions
Overview
Choosing Transfer Function Properties
Using the Boost Transfer Function Option
Default Transfer Function Properties
Transfer Function Pane
Transfer Function Popup Menus
Image Cursor
Overview
Image Cursor Properties
Setting default and local properties
Image Window Properties
Image Plot Properties
Histogram Properties
Centroid Properties
FWHM Preferences
Radial Profile Properties
Palette Properties
Transfer Function Properties
General Properties
Selecting source images for commands
Overview
Image Display
Image Windows
Image Bar
Animation Bar
User Interface
User Interface Overview
Working with Toolbars
Initializing Toolbars and Docking Panes
Docking Panes
Command Dialogs
Command Toolbars
Main Message Pane
Image Cursor Toolbar
Image Keys Pane
Status Bar
Accelerator Keys
Profile Control
Status Bar
Save Window Position
GUI Theme
Changing the GUI theme
Context Menus
Image Context Menu
Image Context Menu for an image set
Plot Context Menu
3-D Plot Context Menu
Grid Context Menu
Dialog Styles
Command Dialogs
Dialog Buttons
Docking Panes
Overview of Docking Panes
Docking Panes Toolbar
Image Bar
Animation Bar
Image Keys Pane
Measurement Panes
Initializing Toolbars and Docking Panes
Property Profiles for Commands
Overview
Profile Control
Grid Controls
Overview
Report Windows
Grid Context Menu
Measurement Panes
Table Properties
Overview
Table Appearance Properties
Table Printing Properties
Menus
Tear-off menus
Main Context Menu
Default Menu Bar
Align Images Menu
Pictures of Menus
Creating new text documents
Default File Menu
Calibration Menu
Diagnostics menu
Edit Menu
File Menu
Measure Menu
Mira Windows
Image Windows
Plot Windows
Grid Controls
Image
Overview
Animation Pane
Image Bar
Image Set Toolbar
Image Window Keystroke Commands
Image Keys Pane
Adjusting the Image Cursor
Command Modes
Cursor Command Modes
Roam Mode
Cursor Mode
Plot
Overview
Plotting Images and Data
Creating a Plot from Table Data
Plotting Examples
Plot Bar
Plot Animation Bar
Plot Properties
Plot Series Properties
Plot Marker Properties
Image Plot Properties
Save Window Position
Chart
Chart Windows
Plotting Images and Data
Creating a Chart from Table Data
Chart Command Menu
Chart Axis Limits
Chart Properties Pane
Chart Series Properties
Chart Titles
Chart Legend Properties
Save Window Position
3-D Plot
Overview
3-D Animation Toolbar
3-D Rotation Toolbar
3-D Drawing Attributes
3-D Light Source Dialog
3-D Viewpoint Dialog
3-D Window Dialog
Save Window Position
File Open
Open Command
Opening & Saving Files
Opening Files from File Lists
Report
Overview
Grid Controls
Report Commands
Report Window Menu
Save Window Position
Grid Properties
Overview
Table Appearance Properties
Table Printing Properties
Text Editor
Overview
Creating a new text document
Text Editor Edit Menu
Text Editor View Menu
Save Window Position
Script Editor Window
Script Editor Toolbar
Script Editor Context Menu
Script Editor View Menu
Save Window Position
Plug-ins
File Opening Plug-ins
Image Processing Plug-ins
Toolbars
Working with Toolbars
Command Toolbars
Image Keys Pane
3-D Animation Toolbar
3-D Rotation Toolbar
Cursor Tools Toolbar
Image Cursor Toolbar
Image Plot Toolbar
Image Set Toolbar
Image Tools Toolbar
Image Bar
Calibration Tools Toolbar
Interactive Repair Toolbar
Main Toolbar
Measurements Toolbar
Working with FITS Format
Overview
FITS Format Definition
FITS keywords
FITS Header Editor
FITS Header Pane
FITS image orientation
List COMMENT Keywords
List HISTORY Keywords
List Statistics Keywords
List WCS keywords
MIRAPROC keyword
Editing the FITS header
Modifying keywords
Adding metadata at file open or file save
Creating an image list from keywords
Searching images for keyword values
Viewing the FITS File Header
Fixing Header Problems in Photometric Data
Image Information Editor (RGB images)
Coordinate Systems
Overview
Image Coordinate System
Pixel Coordinate Definition
Subpixel Coordinate Definition
World Coordinate System
Image Display Orientation
FITS Image Orientation
Image Coordinate Display
Coordinate Commands
Go to cursor coordinates
Go To Object
Astrometric Calibration
Set an arcsecond scale
Set an equatorial scale
Set a linear scale
Set independent linear scales
Set linear world coordinate units
Setting brightness units
Alignment Commands
High precision image registration
Align on Object
Align on Point
Align by WCS
Coordinate Readout
Set X-Axis Linear Format
Set Y-Axis Linear Format
Set Pixel Value Format
Select Image Properties
World Coordinate System
Overview
World Coordinate System Keywords
Deleting the WCS
Astrometric Calibration
Overview
Tutorial
Entering coordinate data
Changing reference point data
Calibration Preferences dialog
Plate Solution Strategy
Other preferences
Measuring Images
Overview
Measurement Panes
Image Measurements Toolbar
Image Cursor Toolbar
Image Keys Pane
Moving the image cursor to a coordinate
Setting Application Properties
Testing using synthetic images
Setting statistical estimator properties
Opening a table in Microsoft Excel
Tutorial: Working with Measurements in a Grid
Angle Measurements
Command overview
Marker properties
Aperture Photometry
Overview of aperture photometry
Apphot Pane for photometry results
Tutorial: Introduction to Aperture Photometry
Tutorial: Doing Time Series Photometry
How Magnitude and Errors are calculated
Editing target data and standard star data
Automatic detection of objects
Plotting a light curve
Kwee - van Woerden
Setting marker attributes
Preparing a report for the AAVSO
Setting the aperture size and shape
Setting photometry keywords
Fixing header problems in photometric data
Importing a photometry catalog
Calculate Julian Date
Definitions of measurements
Definitions of errors
Understanding signal to noise ratio
Aperture Photometry Toolbar
Aperture Photometry Properties
Aperture Photometry Properties dialog
Point Markers
Calibration Results
Image Information
Photometry Keywords
AAVSO Reporting
Other Properties
Measurement Output
Astrometric Calibration
Overview
Tutorial
Plate Solution Strategy
Centroid Measurements
Command overview
Centroid properties
Distance & Angle Measurements
Command overview
Measuring Distance and Angle
Example
Angle Measurement Definition
FWHM Measurements
Command overview
FWHM properties
PSF Fit Properties
Labeling Images
Overview
Label Properties
Examples
Line Measurements
Command overview
Marker properties
Plot Line Measurements
Command overview
Marker Properties
Plot Point Measurements
Plot Point Measurements
Marker Properties
Shape Properties
Point Measurements
Command overview
Marker properties
Region Measurements
Command overview
Marker properties
Region properties
Statistics Measurements
Command overview
Statistics Measurements
Statistics properties
List Statistics Keywords
Remove Statistics Keywords
Marker Properties
Overview
Drawing Properties
Centroid Properties
Region Properties
Copying & Pasting Markers
Copy Markers
Paste Markers
Scatter Plots
Scatter Plot command
Tutorial: Making a Scatter Plot of Measurements
Selecting Cells in a Grid Control
Point Sampling
Overview
Pixel Table Pane
Viewing and editing pixel values
Report Windows
Overview
Grid Controls
Grid Context Menu
Optimizing the column width
Opening a table in Excel
Table Properties
Table Printing Properties
Table Appearance Properties
Plotting Images and Data
Overview
Plot Bar Pane
Creating a Chart from Table Data
Creating a Plot from Table Data
Examples of plot types
Examples of row plots
Setting Application Properties
Horizontal Slice Plot
Vertical Slice Plot
Plot Windows
Overview
Creating a Plot from Table Data
Plot Bar
Plot Animation Bar
Plot Keys Pane
Plot Context Menu
Set X-Axis Format
Set Y-Axis Format
Plot Series Data
Plot Measurements
Go to Source Image
Plot Averaging Modes
Saving a plot as a text file
Save Window Position
Window Properties
Plot Properties
Plot Series Properties
Chart Windows
Chart Windows
Creating a Chart from Table Data
Chart Command Menu
Chart Axis Limits
Chart Properties Pane
Chart Series Properties
Chart Titles
Chart Legend Properties
Save Window Position
Working with Plot Series
Changing Plot Series Attributes
Overplotting & Animating
Go to Source Image
Copying & pasting plot series
Adding series to a line profile plot
Plot Default Marker Properties
Setting marker attributes before the plot
Default Series Properties
Plot Series Properties
Plot Series Data
Column and Row Profile Plots
Column profile plots
Making a column profile plot
Row profile plots
Making a row profile plot
Plotting an averaged line
Overview
Plot Averaging Modes
Changing the Plot Appearance
Changing Plot Attributes
The Plot Attributes dialog
Using a dialog shortcut
X Axis Properties
Y Axis Properties
Plot Labels
Frame Properties
Selecting a Coordinate System
Plot coordinate systems
Using World Coordinates
Comparison of coordinate systems
Line profile plots
Command
Creating a Line Profile plot
Adding series along different lines
Adding parallel series
Preferences
Setting Line Profile preferences
Centroid Preferences
Marker Properties
Radial profile plots
Making a radial profile plot
Radial Profile Properties
PSF Fit Properties
Histogram plots
Making a Histogram plot
Histogram Properties
Comparison of Histogram Preferences
Making a Bit Histogram plot
Plot Measurements
Overview
Plot Point Measurements
Plot Line Measurements
Statistics Measurements
Statistics Properties
Mark Statistic
Plot Marker Properties
Plot Notes Pane
Scatter plots
Scatter Plot command
Tutorial: Making a Scatter Plot of Measurements
Selecting Cells in a Grid Control
Pixel Series plots
Plotting a value through an image set
3-D plots
3-D Surface Plot command
3-D Plot Type Examples
3-D Z-Scaling Examples
Preferences
3-D Viewpoint
3-D Window Dialog
3-D Drawing Attributes
3-D Light Source
Surface Plot Z Limits
Contour plots
Contour Plot command
Contour Plot Properties
Contour Drawing Properties
Interactive Contour Plot command
Interactive Contour Properties
Contour Plot Smoothing
Copy & Paste
Example
Copying plot data to the clipboard
Pasting plots from the clipboard
Copying the window bitmap
Printing Plots
Overview
Properties
Overview
Printing Placement Properties
Printing Overlay Properties
Printing Heading Properties
Printing Text Properties
Calibrating Images
Selecting Source Images
Overview
Creating synthetic images
Trimming an image section
Adding metadata at File Open or Save
Modifying header keywords
Creating a Pixel Mask
Applying a Pixel Mask
Image Combining Strategy
Editing and Creating a Blemish Mask
Applying a Blemish Mask
File Event Scripting
Astrometric Calibration
Express Image Calibration
Express Image Calibration
Bias Correction Properties
Dark Correction Properties
Flat Correction Properties
Cosmetic Correction Properties
Creating a Master Bias
Create Master Bias
Image Combining Strategy
Creating a Master Dark
Create Master Dark
Image Combining Strategy
Create Master Flat
Create Master Flat
Flat Frame Selection Criteria
Image Combining Strategy
Create Illumination Flat
Create Illumination Flat
Flat Correction Properties
Image Combining Strategy
Create Pixel Flat
Create Pixel Flat
Flat Correction Properties
Image Combining Strategy
Repairing Artefacts and Cosmetic Defects
Overview of Methods
Cleaning artefacts from an image set
Interactively Repairing Defects
Evaluating repair techniques using synthetic images
Blemish Masks
Creating and editing a blemish mask
Applying a Blemish Mask
Pixel Masks
Creating a Pixel Mask
Editing a Pixel Mask
Applying a Pixel Mask
Removing Stars from Images
Overview
Changing the aperture properties
Viewing data for template samples
Properties
Overview
Point Properties
Other Properties
Processing Images
Overview
Command Dialogs
Selecting Source Images
Image Types
Image Region Commands
Testing calibration strategies using synthetic images
Image Keys Pane
File Event Scripting
Adding metadata at File Open or Save
Creating an image list from keywords
Searching images for keyword values
Cosmetic Repairs
Interactive Repair
Interactive Repair Properties
Removing cosmic rays from an image set
Blemish Masks
Creating and editing a blemish mask
Applying a blemish mask
Pixel Masks
Creating a pixel mask from an image
Editing a pixel mask
Applying a pixel mask
Removing Stars from Images
Overview
Changing the aperture properties
Viewing data for template samples
Properties
Overview
Markers
Background
Sample Data
Combining Images
Combine Image Set
Combine Files
Image combining methods
Setting normalization preferences
Region Statistics
Aligning Images
Overview
Aligning on a point
Aligning on an extended object
Aligning using the WCS calibration
High Precision Registration command
Overview
Tutorial: Introduction to Image Registration
Example using Point Tracking
Image Registration Properties
Image Registration Properties Dialog
Resampling
Background
Image Registration Residuals
Marker Properties
Resampling Properties
Tracking Properties
Image Region Statistics
Overview
Estimators
Editing & Copying
Overview
Duplicating to a new window
Emptying the Clipboard
Math Commands
Overview
Arithmetic Operations
Change Pixel Type
Combine Image Set
Fit Background
Image Arithmetic
Normalize Image
Region Statistics
Value Arithmetic
Using Plug-ins
Geometry Commands
Overview
Rotating Images
Rotation Menu
Affine Transformation
Expand Image
Imbed Image
Mirror
Reverse
Rotate
Rotate by angle (from Image Toolbar)
Scale
Shift
Transpose
Cropping to specified bounds
Cropping to the Image Cursor
Cropping by a rectangle
Align Horizontal
Align Vertical
Commands for RGB data
Working with RGB Images
Applying a palette to the pixels
Converting to RGB
Converting to Grayscale
Converting to 16 bit Luminance
Converting to 8 bit Luminance
Removing color noise
Extracting channels
Making an LRGB Image
Making an RGB Image
Commands for Intensity data
Extracting byte planes
Converting the data type
Converting to RGB
Undo
Using undo
Filtering Images
Overview
Removing Extreme Pixel Values
Cosmic Ray Filter
De-speckle Filter command
Clip High Values
Clip Low Values
Rank Filtering
Rank Filter
Median Filter
Minimum Filter
Maximum Filter
Smoothing Image Details
Rectangle Filter
Elliptical Filter
Binomial Filter
Gaussian Filter
Block Average Filter
Block Sum Filter
Sharpening Image Details
High Pass Filter
Unsharp Mask
Maximum Entropy command
Maximum Entropy example
Enhancing Edges
Gradient Filter
Rotational Gradient Filter
Rotational Gradient example
Laplacian Filter
Miscellaneous Kernel Filters
Custom Filter Kernel
3x3 Custom Filter command
Extracting Sources from Images
Using the MExtract Module
Definitions of Extracted Properties
Running the Pipeline
Tutorial
Preferences
Properties for the Source Extraction Tutorial
Source Extraction dialog
Procedure page
Background page
Detect page
Filter page
Match page
Difference page
Post Process page
Post Processing Options
Centroid Properties (Source Extraction)
FWHM Properties (Source Extraction)
PSF Fit Properties
Aperture Photometry Properties
Variability Properties
Image Diagnostics and Calculations
Overview
Create Synthetic Image
Bit Histogram Plot
Calculate Airmass
Calculate Gain
Calculate Image Scale
Calculate Julian Date
Calculate Readout Noise
Using the Pro Script Module
Working with scripts
Using the Script Editor Window
Using the Script Manager
Editing script keywords
Save Window Position
Related Topics
Script Editor Toolbar
Script Editor View Menu
Script Editor Context Menu
File Event Scripting
File Event Scripting
Tutorial: Introduction to File Event Scripting

Mira Pro x64 User's Guide

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Selecting Source Images


NOTE: This topic applies only to global processing commands provided in the menus opened using the button on the Main Toolbar. The commands in this button menu select source (input) images from files, folders, image windows, etc. A parallel track of immediate mode commands is available from the menus for Image Window windows. The immediate mode commands simplify the image selection process by obtaining their source images only from an Image Window. For more information, see Command Dialogs.

Source images for global processing commands are the "input" images used by a parent command, such as images being rotated by Rotate Images or calibrated using Express Image Calibration. This topic describes the options for source image selection provided through the Select Source Images dialog. This dialog does not actually collect the images but sets the properties used for subsequent image collection by the parent command. Each parent command has an independent set of image selection properties.

For collecting source images, Mira commands use a common interface, the Source Images Control Group shown below. This group accesses the Select Source Images dialog for configuring how the command will collect its source images. This group is shown below as it appears on a generic command dialog. Use the [Select] button to open the Select Source Images dialog for setting source image selection properties. Later, when the command is executed, images are collected and processed according to the properties configured in the Select Source Images dialog.

Here is the Source Images Control Group appearing in the command dialog:

The Select Source Images dialog includes 6 pages: the Select Method page for choosing the source image selection method, and 5 pages for configuring each of the selection methods. Commands remember their source image selection properties, and these properties are initialized the next time Select Source Images is used by the command.

NOTE

Selecting the source images from a window or one of the file options may also change properties appearing in the parent command dialog.

Specifying the Source Images

Specifying how source images are collected is a two-step process. Usually, it is not necessary to complete both steps each time for a given command as the parameters are saved specifically for the command (for example, source image properties for Image Arithmetic and Rotate Image are saved independently). The properties for a given command do not usually need changing unless the image selection is volatile by using different file names, a different folder, different image window, and so on.

The source selection properties are configured in a two-step process using the pages listed in the left panel of the Select Source Images dialog. The top page, named Select Method..., is used to choose the source, while the 5 pages underneath are used to configure the source. This two-step process is outlined below. The order they are completed is not important:

  • Use the Select Method... page to select the source.

  • For the selected method, open its source page and configure the properties.

Each of the 6 pages in the Select Source Images dialog is described below.

Select Method... Page

The Select Method... page shows a bullet list of pages with options for selecting images. The selected (bulleted) method is passed back to the parent dialog using the properties configured on the specific method page. The method pages are configured by selecting them from the list in the left panel of the dialog. Click the name to configure the properties of the selected method. For example, the picture below shows the "Folder" method selected as the target method. To configure the Folder method,. click its name in the left panel and set its properties as desired.

Image Window Page

The Image Window page selects images displayed in an Image Window. The list box contains the name of the current image for each Image Window on the Mira desktop. The window list is created when this dialog is opened, and it will be empty if no Image Windows are open. If selecting images from an Image Window, it is often simpler to use the "immediate mode" version of the command from the Image Window menu (see Command Dialogs).

Current image in current window:

Use the button to select the target Image Window from among all open image windows. This field lists the name of the image displayed in the selected Image Window. If an Image Set is displayed, only the name of the currently displayed member of the image set is listed.

 Save Undo Copy

Check this box to instruct Mira to save an Undo copy of each image before it performs processing. Saving an undo copy increases the memory used by each image in the Image Window.

Folder Page

The Folder page selects images from files in a folder. Optionally, several file selection rules may be used to filter which images will be selected from the folder. If no rules are used, then all files in the folder will be selected. This page remembers its settings between sessions, however it is possible that the listed folder may not exist in a new session.

Target Folder:

Use the [...] button to open a browser for selecting the folder containing the images.

File Selection Rules:

This group provides optional ways to filter files from among those in the selected folder.

 Use File Template

To use a file name template, check this box and specify the file name template in the list box to the right. The template may be as simple as a file extension or may be a more elaborate file name pattern using * and ? wildcard characters. Use the [+] and [x] buttons to add or delete the currently displayed entry.

 Use Keyword

For images in FITS format, check this box to select only image files that have the specified header keyword and Keyword Value. For example, using IMAGETYP as the keyword and Light as the keyword value selects only files containing FITS format images with the header entry IMAGETYP = 'Light'. Use the [+] and [x] buttons to add or delete the currently displayed entry.

Checking the Use Keyword box activates two fields, one for the keyword name and the other for the keyword value.

Keyword Value

Enter the value of the selection keyword. For example to select files that have an exposure time of 60 seconds, set the keyword as EXPTIME and the Keyword Value as 60. Use the [+] and [x] buttons to add or delete the currently displayed entry.

Drag and Drop Page

The Drag and Drop page provides a "hot" target area where files can be dropped using the Windows drag & drop technique. Files are selected by marking them in Windows Explorer (the file manager), then dragged onto the target area.

Select Files by Dragging form Explorer

The large box is a "file drop target" that uses the Windows drag & drop protocol. You can mark more files than will be selected by filtering the files using a file Extension,

[Accept List]

Accepts the dropped list of files by triggering the [Apply] button at the bottom of the dialog.

[Clear List]

Click this button to empty the list of files in the drop box.

 All Files

Bullet this option to select all files from among those dragged from Explorer.

 Extension:

Bullet this option to select files matching a specified file name extension. Starting with those files dragged from Explorer, only files with the specified file extension will be dropped into the box. The above example shows that files matching the extension *.fts will be selected.

Mira File List Page

The Mira File List page is used for selecting a Mira File List containing the selected files. The Mira File List is a single text file containing the full path specification for 1 or more files. File lists have a .axf file extension. This page remembers the file list between sessions, however it is possible that the file list may not exist in a new session.

File list name:

Use the [...] button to open a browser for selecting the Mira File List.

Browse Files Page

The Browser Files page opens a Windows Open dialog for selecting files. A powerful feature of this page is the Append Files option. This causes new files to be added to the list of files already in the box. The [Browse...] button activates the standard Windows Open dialog for selecting files. A limitation of the Open dialog is that it can only select files from a single folder at one time. Checking Append Files allows you to browse different folders, each time adding files from a new folder to the growing list.

[Browse...]

Click this button to open a standard Windows Open dialog for choosing files.

Clear List

Click this button to clear the entire contents of the file listing.

 Append Files

Check this box to allow new files to append the list of files already in the box.

 Save List

Check this box to save the file list for loading the next time this page is used for this command.

Related Topics

Contents

User Interface

File Lists

 


Mira Pro x64 User's Guide, Copyright Ⓒ 2023 Mirametrics, Inc. All Rights Reserved.